Publicly available data and code
A knowledge base for therapeutic uses of venoms. As of its original release, contains 39,000 mined from MEDLINE describing potentially therapeutic effects of venoms on the human body.
Network analysis framework that identifies adverse event (AE) neighborhoods within the human interactome (protein-protein interaction network). Drugs targeting proteins within this neighborhood are predicted to be involved in mediating the AE.
Interspecies, network-based predictions of synthetic lethality. The original release contains ~109 million gene pairs with their associated synthetic lethality scores.
Results of the Transcription Factor-Indepdent Component Analysis method to more accurately link TFs to their gene targets using ChIP-Seq and expression data.
Drug side effects were mined from publicly available data. Offsides is a database of drug side-effects that were found, but are not listed on the official FDA label.
Drug interactions were mined from publicly available sources. Twosides is the only comprehensive database drug-drug-effect relationships.